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BPSL1329 BPSL1329 BPSL1331 BPSL1331 BPSL1330 BPSL1330 BPSL1332 BPSL1332 BPSL1333 BPSL1333 mdcB mdcB BPSL1327 BPSL1327 BPSL1328 BPSL1328 accD accD BPSL1335 BPSL1335 BPSL0072 BPSL0072
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL1329Similar to Xanthomonas campestris alpha subunit of malonate decarboxylase xcc3609 SWALL:AAM42879 (EMBL:AE012482) (548 aa) fasta scores: E(): 2.1e-149, 69.78% id in 546 aa, and to Burkholderia cepacia malonate decarboxylase alpha-subunit MdcA SWALL:Q93L22 (EMBL:AF029344) (560 aa) fasta scores: E(): 3.2e-148, 69.55% id in 555 aa. (548 aa)    
Predicted Functional Partners:
BPSL1331
Similar to Xanthomonas axonopodis beta subunit of malonate decarboxylase xac0562 SWALL:AAM35451 (EMBL:AE011683) (306 aa) fasta scores: E(): 5.1e-55, 57.14% id in 294 aa, and to Burkholderia cepacia malonate decarboxylase beta-subunit MdcD SWALL:Q93L24 (EMBL:AF029344) (297 aa) fasta scores: E(): 1.3e-51, 55.17% id in 290 aa. Note: this CDS is longer in its N-terminal region than most of its database matches.
 
 
 0.987
BPSL1330
Similar to Xanthomonas campestris delta subunit of malonate decarboxylase xcc3610 SWALL:AAM42880 (EMBL:AE012482) (105 aa) fasta scores: E(): 2e-16, 56.43% id in 101 aa, and to Burkholderia cepacia malonate decarboxylase delta-subunit MdcC SWALL:Q93L23 (EMBL:AF029344) (108 aa) fasta scores: E(): 2.4e-12, 52.8% id in 89 aa.
 
  
 0.978
BPSL1332
Similar to Xanthomonas axonopodis malonate decarboxylase gamma subunit xac0563 SWALL:AAM35452 (EMBL:AE011683) (234 aa) fasta scores: E(): 2.1e-27, 44.63% id in 233 aa, and to Burkholderia cepacia malonate decarboxylase gamma-subunit MdcE SWALL:Q93L25 (EMBL:AF029344) (233 aa) fasta scores: E(): 2.8e-24, 42.6% id in 230 aa.
 
     0.947
BPSL1333
Similar to Xanthomonas axonopodis malonate decarboxylase xac0564 SWALL:AAM35453 (EMBL:AE011683) (213 aa) fasta scores: E(): 4.5e-11, 44.36% id in 142 aa, and to Burkholderia cepacia MdcG SWALL:Q93L26 (EMBL:AF029344) (230 aa) fasta scores: E(): 5.8e-08, 35.11% id in 168 aa.
 
     0.944
mdcB
Putative coenzyme-A synthase; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.
 
  
 0.878
BPSL1327
Putative malonate transport-related system membrane protein; Similar to Pseudomonas putida malonate transporter MdcL SWALL:Q9Z446 (EMBL:AB017138) (163 aa) fasta scores: E(): 5.7e-27, 66.15% id in 130 aa, and to Acinetobacter calcoaceticus malonate carrier protein MdcL SWALL:Q9RGM5 (EMBL:AF121266) (133 aa) fasta scores: E(): 3.3e-19, 51.9% id in 131 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches.
 
  
 0.824
BPSL1328
Putative malonate transport-related system membrane protein; Similar to Pseudomonas putida malonate transporter MdcM SWALL:Q9Z445 (EMBL:AB017138) (254 aa) fasta scores: E(): 1.6e-59, 72.51% id in 251 aa, and to Malonomonas rubra MadM SWALL:O06932 (EMBL:U87980) (255 aa) fasta scores: E(): 2.3e-48, 61.53% id in 247 aa.
 
     0.812
accD
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
  
 
 0.795
BPSL1335
Similar to Escherichia coli malonyl CoA-acyl carrier protein transacylase FabD or TfpA or b1092 SWALL:FABD_ECOLI (SWALL:P25715) (308 aa) fasta scores: E(): 2.6e-14, 29.66% id in 300 aa, and to Xanthomonas campestris malonyl CoA-ACP transacylase MdcH or xcc3615 SWALL:AAM42885 (EMBL:AE012482) (306 aa) fasta scores: E(): 3.1e-40, 48.36% id in 306 aa, and to.
 
  
 0.670
BPSL0072
Putative type-b cytochrome; Similar to Escherichia coli cytochrome b561 CybB SWALL:C561_ECOLI (SWALL:P08732) (176 aa) fasta scores: E(): 1.5e-07, 31.66% id in 180 aa, and to Xanthomonas axonopodis pv. citri str. 306 cytochrome b561 YodB SWALL:AAM38827 (EMBL:AE012047) (180 aa) fasta scores: E(): 7.9e-37, 60% id in 170 aa.
  
     0.454
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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